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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs7195790 chr16:67522289 A/G 0.000121 406 15.33 15.13 19.2 KM Plot
LGG rs720888 chr11:61215212 A/G 3.06E-5 406 17.73 17.67 14.5 KM Plot
LGG rs720891 chr11:61215619 G/T 3.06E-5 406 17.73 17.67 14.5 KM Plot
LGG rs7210041 chr17:46113822 C/T 0.000126 407 15.32 15.53 6.83 KM Plot
LGG rs72228627 chr12:69814535 AAC/A 0.000198 404 15.2 16.33 10.5 KM Plot
LGG rs72627116 chr14:74351973 C/T 1.57E-7 404 14.67 17.12 3.93 KM Plot
LGG rs72627117 chr14:74355233 T/C 1.39E-7 405 14.67 17.2 3.93 KM Plot
LGG rs72627119 chr14:74356274 C/G 1.39E-7 405 14.67 17.2 3.93 KM Plot
LGG rs72627120 chr14:74363480 G/A 1.63E-7 406 14.67 17.43 3.93 KM Plot
LGG rs72627122 chr14:74368236 A/G 1.82E-7 405 14.67 17.2 3.93 KM Plot
LGG rs72627123 chr14:74368331 A/G 1.82E-7 405 14.67 17.2 3.93 KM Plot
LGG rs72627124 chr14:74369128 A/G 1.9E-7 404 14.73 17.2 3.93 KM Plot
LGG rs72627125 chr14:74369623 G/C 1.9E-7 404 14.73 17.2 3.93 KM Plot
LGG rs72627126 chr14:74370024 C/T 1.9E-7 404 14.73 17.2 3.93 KM Plot
LGG rs72627127 chr14:74370098 G/A 1.9E-7 404 14.73 17.2 3.93 KM Plot